Scientists construct molecular “knots”

The molecular "knots" have dimensions of around two nanometers.
Date:25 July 2010 Tags:, ,

Scientists have constructed molecular “knots” with dimensions of around two nanometers (2 x 10-9 nm), about 30 000 times smaller than the diameter of a human hair.

Most molecules are held together by chemical bonds between atoms – “nano-knots” are instead mechanically bonded by interpenetrating loops. Scientists at the University of Liverpool have managed to create nanoscale knots in the laboratory by mixing together two simple starting materials – one a rigid aromatic compound and the other a more flexible amine linker.

This is an unusual example of “self-assembly”, a process which underpins biology and allows complex structures to assemble from more simple building blocks. Each knot is “tied” three times: that is, at least three chemical bonds must be broken to untie the knot. A single knot is a complex assembly of 20 smaller molecules.

Professor Andrew Cooper, Director of the University’s Centre for Materials Discovery, said: “I was amazed when we discovered these molecules; we actually set out to make something simpler. A complex structure arises out of quite basic building blocks.

“It is like shaking Scrabble tiles in a bag and pulling out a fully formed sentence. These are the surprises which make scientific research so fascinating.”

The experimental work was led by Dr Tom Hasell, a Postdoctoral Researcher, who recognised that the data in an experiment to create organic nanocages was anomalous. In particular, the mass of the molecules was twice as high as expected, a result of the complex mechanical interlocking of two molecular sub-units. The team is now focusing on the practical application of these molecules and similar structures – for example, to build molecular “machines”, which can trap harmful gases and pollutants such as carbon dioxide.

The research, which was published in the journal Nature Chemistry, forms part of a broader five-year programme focusing on the synthesis of new materials for applications such as energy storage and conversion.